Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898140.1_cds_XP_016448392.1_43051
CDS Infomation

[gene=LOC107773497] [db_xref=GeneID:107773497] [protein=putative E3 ubiquitin-protein ligase XBAT31] [protein_id=XP_016448392.1] [location=complement(join(333..728,1032..1290,1454..1561,1704..1844,2044..2165,2281..2352,2512..2571,2667..2846))] [gbkey=CDS]
Sequence

ATGGGTCAGGGTTTGAGTTGTGGATCAGGTGATGAACATGGCTTATTCAGTGCTGTACAG
TGTGGTGATGTGGAGACATTAAAAGCTGTTTTGGAGAAAAACCCATCTCTAATTCATCAT
TCTACAGTGTATGATCGACAGTCAGCTTTGCATATTGCTGCTGCCAATGGTCAGATCGAG
GTTGTTACTATGCTGTTAAACCAATCTGTCAACCCGGATTTGTTAAATCGTTATAAGCAG
ACTCCATTGATGTTAGCAGCAATGCACGGGAAGATCTCTTGTGTGCAAAAGCTTATTGAA
GCAGGAGCAAATATTTTGAAGTTTGATTCGCTTAATGGAAGAACATGTTTGCACTATGCT
GCTTACTATGGTCACTCTGAATGCCTTAAAGCAATTCTTTCCTCGGCTCGCACGTCTCAT
GTTGCAGCATCTTGGGGATATACCCGGTTTGTGAATGTTAGAGATGGAAAAGGAGCAACT
CCTTTGCACTTAGCAGCCCGTCAAAGACGGCCTGAATGTGTTCACATTTTACTGGATAAT
GGCGCGTTGGTTTGTGCTTCAACTGGCGGCTATGGATTTCCCGGTAGCACTCCACTTCAT
TTGGCTGCAAGAGGTGGTTCTCTTGATTGCATCCGCGAATTATTGGCGTGGGGAGCAGAT
CGACTACACAGAGATGCCTCGGGGAGAATACCGTACACGGTTGCTTTAAGATACCACCAC
GGTGCATGTGCGGCTTTGTTGAATCCTTCATCAGCAGAGCCTCTCGTGTGGCCATCACCG
TTGAAGTTCATCAGTCAGCTCAATGAAGAGGCGAAAGCTCTACTTGAAAGTGCCTTAATG
GAAGCAAATAAGGAGAGGGAAAAGAATATCCTAAAGGGGACAGATTACTCGCCGCCATCC
CCAGCTCAATCTGATGCAGGGATGGATGATAACATCTCTGAGGTCAGTGATACAGAAGTA
TGTTGTATATGTTTCGATCAATTATGCACAATTGAGGTCCAGGACTGTGGGCACCAAATG
TGTGCACATTGTGTACTGGCCTTGTGCTGCCATAACAAGCCAAATCCGACCACGACTAGT
CCACCAGAACCAGTGTGCCCGTTTTGCAGAAGCAACATTGTACAATTACATGTTATCAAG
GTTACAAAGGACGATGACATAGACCGTGATATCTCCTCAAAGCTTCGAAAGTCTAGGAGA
TCACGAAACTTCAGCGAGGGAAGTAGTAGTTTTAAGGGCTTATCAGCAGTTAGTTCTTTT
GGCAAAATGACTGGCCGTGGCTCGGGTAGGATCGCTGCTGAAAACGAATGGATCGATAAG
CCATTAACCGTTGATTGA

Peptide Sequence

PEP ID

XP_016448392.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tabacum]
Sequence

MGQGLSCGSGDEHGLFSAVQCGDVETLKAVLEKNPSLIHHSTVYDRQSALHIAAANGQIE
VVTMLLNQSVNPDLLNRYKQTPLMLAAMHGKISCVQKLIEAGANILKFDSLNGRTCLHYA
AYYGHSECLKAILSSARTSHVAASWGYTRFVNVRDGKGATPLHLAARQRRPECVHILLDN
GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLHRDASGRIPYTVALRYHH
GACAALLNPSSAEPLVWPSPLKFISQLNEEAKALLESALMEANKEREKNILKGTDYSPPS
PAQSDAGMDDNISEVSDTEVCCICFDQLCTIEVQDCGHQMCAHCVLALCCHNKPNPTTTS
PPEPVCPFCRSNIVQLHVIKVTKDDDIDRDISSKLRKSRRSRNFSEGSSSFKGLSAVSSF
GKMTGRGSGRIAAENEWIDKPLTVD

Transcript Sequence

Gene sequence data has not been registered.